ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9607665 | NTERA-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◣ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

H2BU1
H2AW
ZGPAT
ARFRP1
KIF21B
ADCY1
SCARB1
CRYAA2
CRYAA
LMOD1
SKIL
ATP6V1B1
MUC20
CYP26A1
LFNG
CARM1
GJB6
MINDY2
METTL11B
LRRC20
MAP3K6
FCN3
FAM222A
MDM2
VIPR2
NR2F6
DRD4
SH2B1
INHBE
GLI1
CYP1A1
KCNF1
LEFTY2
OTP
ZNF740
CSAD
LINGO1
MACF1
CRABP2
SOCS3
SERPINB9
N4BP3
METTL26
WFIKKN1
CADPS
CPLX1
SOX1
VPS4A
AGO1
SPRED2
PKNOX2
HOXB1
FBXO41
EGR4
KCNN4
USP3
HECTD4
CRLF1
TMEM59L
JUNB
PRDX2
FOXL2NB
FOXL2
TAGLN2
DUX4
CDKN2C
ARHGAP30
ZSWIM1
SPATA25
NEURL2
CTSA
ITM2C
PDE12
SNCG
MMRN2
PCTP
RPS8
HPD
LHX4
ERCC1
BMF
SLC12A9
EPHB4
C16orf70
DLX5
KCNQ4
CPE
NODAL
CLDN2
RHOC
EVA1C
MAPKAPK2
NUP210L
SPACA6
ITGB2
FAM207A
LTBP3
LZTFL1
GBX2
CCND3
NFASC
NECTIN4
LEFTY1
EXTL1
FAM110D
SPN
MAP11
LAMTOR4
ATP6V0A4
NAPSA
SPRYD3
GPR20
PANK2
EVPL
KLF16
FGF6
ADAM11
PCGF1
LBX2
TLX2
BIRC7
PLEKHA6
CHN2
CPVL
SERPINF2
TPRA1
MCM2
TRIM56
PKDCC
TMEM88B
VWA1
ASB6
KMT5C
BRI3
CCL26
ZBTB38
BTG2
PCDH1
RBKS
BABAM2
OLFM4
PHC2
CARD14
KCNJ4
FSCN1
TREX1
SHISA5
ADGRA2
CERCAM
CXCR5
MEGF9
SFXN3
PDZD7
LINGO4
DUSP4
HPDL
HAP1
METRN
ANTKMT
CCDC78
GPR35
ARHGAP33
EPHB3
MACROH2A2
TCTEX1D4
PLK3
BTBD19
TLN1
CREB3
LAPTM5
CHCHD10
C22orf15
SUSD3
MIDEAS
CSRNP1
CDX1
SERPINB6
MUC3A
SH2D6
PAX7
PRELID3B
ZNF746
IGFBP5
LDB3
KLHL26
TNC
ARRDC2
ARRB1
RD3
MS4A4A
UTS2R
WDR18
MTF2
TRIOBP
TRAPPC3
MAP7D1
GATD3B
GATD3A
RNF224
RNF208
CYSRT1
SOAT2
IGFBP6
SSTR5
AHSP
DYSF
GPC6
FOXK1
GAST
GALNT2
RARA
MYRF
ZFHX3
CCDC120
KCNJ10
PDE2A
MYEOV
HEY2
SH3BP2
CD2
MDK
SIM2
RHOF
SETD1B
PDE6B
HUS1
DIPK1B
PRSS47
AHDC1
FBLN1
LOXL1
SRCAP
LOC730183
RIC8B
APOBEC3G
NHLH1
CECR2
DPEP2
DPEP3
PPIA
TPPP3
PSMG3
PRKCZ
NDUFS7
WBP1L
TNF
LTA
TCF7L2
ATP1A4
WDR81
TLCD2
PIK3CG
SOX5
HOXC4
CRB2
TRIL
CFAP20DC
TSPAN18
FBLN2
CDC42EP2
APOBEC3D
APOBEC3C
LOC102724770
DGCR6
DHDDS
CHRNB3
FGFR1
GUCA2A
DNAH1
LOC105376731
NRSN2
CRHR2
LIF
SCN5A
ANXA2
CDC25B
C1orf167
OTUD7B
KRBA1
TTYH2
SERPING1
IGDCC3
CNPY1
ADM
RASSF7
LMNTD2
SHANK2
KDM6B
MLPH
CCDC149
SOCS2
DYNLL1
CASD1
SH3D21
NR2E1
DONSON
NR2C1
FOXO6
YPEL3
TBX6
CCDC33
ORAI2
CNR1
TLE1
NR2C2
AMDHD2
ATP6V0C
RUNX1T1
ACYP1
ZC2HC1C
NFE2L1
SH3PXD2A
RCC1
POLR2H
CLCN2
SMIM35
ACKR2
HIGD1A
NFE2
ATN1
ENO2
LHCGR
PPP1R35
SLC45A3
PMEPA1
ADAMTSL5
FOXJ3
CRYBG2
STRA6
MAMDC2
LARP1
CRISPLD2
CHI3L1
MYBPH
KRT24
OTOF
FAM166C
BFSP1
MRPS2
C9orf116
TRPV4
ANKRD39
ITFG2
MNX1
DAB2IP
ANKRD23
COX5A
NUP188
DOLK
CELSR2
NES
ZNF436
ETV4
NID1
PDGFA
TCEA3
FOXE3
SLC11A2
SLC16A8
TMEM210
LRRC26
SLC4A2
CDK5
ASIC3
MRM1
DHRS11
CYBA
RNF103-CHMP3
RMND5A
DEPP1
AP5B1
OVOL1
CRIP2
NAP1L4
ARL8A
PRR5
PRR5-ARHGAP8
URM1
DUS1L
GALP
NAT8L
CADM3
MGAT3
PALM2AKAP2
ATP5MC3
CRYBA1
SNX12
GBA
DUSP23
ANOS1
NGFR
KRTAP12-1
UPF3A
OSTM1
ELMO3
RSPO1
MNT
STX10
IER2
TRABD
NEFH
HEYL
CAPN13
CDCA7L
PPCDC
AKIRIN1
STAB1
HOXA1
PCNA
CDS2
IL17RD
PTGES3
ATP5F1E
TUBB1
TDRD10
SHE
HRK
HTR6
KAT6B
SH3BP4
GPR162
P3H3
DHX32
THEM5
FAM20C
BOLA3
EEA1
INHBB
SEMA5B
ZEB2
MTRNR2L1
YIF1B
KCNK6
PRDM15
SLC25A6
GPER1
GABRB2
SYT2
TECPR1
SERTAD2
GOLGA6D
ARID3B
ATF3
NUF2
HAL
RIPOR3
SMYD2
LIN28A
KAT6A
SULT1A1
RIPOR1
ZSCAN10
CNOT2
FAM131B
PTP4A2
ARID5A
ZIC3
SEMA7A
AP1B1
IFNLR1
UHRF1BP1L
C1orf198
ADGRA1
DOT1L
NFE2L3
TCF7
USO1
MTRNR2L2
MSH3
DHFR
SLCO4A1
HIRIP3
PLAGL1
DTX4
FAM72C
SRGAP2B
FAM72D
ABHD14B
ABHD14A-ACY1
ABHD14A
ACY1
RUNX3
NIPSNAP2
ZFP36L2
SHANK1
CLEC11A
GPCPD1
BCL9L
PTPN6
RIN2
PHB2
SLC34A3
ZNF664-RFLNA
ZNF664
CCDC92
INTS10
L1TD1
NAALAD2
STX18
SDSL
CORO6
DNMT3L
SDS
MTRNR2L8
BHLHE40
NPAS2
NANOS3
KIF5C
GET3
DSTYK
TNFRSF6B
BEST2
LHPP
DENND5B
FGFR4
MYL9
USP30
MSI1
TNP1
TMEM250
ITPK1
GPRC5A
FAM83F
CDKN1A
CLDN9
CLDN6
ZFHX2
C15orf39
SSBP4
SAMD11
ZBTB17
CXCL12
KRT82
DLC1
TTYH3
ZNF202
RPH3A
GLIS2
ARAP3
CFAP74
UFSP1
ACHE
RBBP5
LZTS1
STUB1
RHBDL1
GDPD5
RHOT2
SOX4
ZNF385A
MSLN
LY6E
LMF1
SOX8
SCAP
WNT2B
FNDC5
POU4F1
FOXP1
AFAP1
UXS1
LOC389199
NBPF15
C10orf105
CTSZ
DNAJB5
TBC1D9
HHIPL1
CCDC85C
KANSL3
FER1L5
LRMDA
ZFHX4
OAF
ZBTB46
TMEM132B
BCAP31
ABCD1
HDAC4
SV2A
DNTT
FASN
AIFM3
LIMK1
ECE1
TOP2B
SULT2B1
GSG1
LPCAT3
MBD6
DDIT3
SLC30A4
SIPA1
CDK18
EGFL7
PPP2R3A
RGPD1
RGPD2
IKZF4
SBNO2
FXYD3
BAHCC1
SF3A3
CRELD1
PHLDA3
PLPP2
ANHX
ORMDL3
GSDMB
MPPED1
SLPI
SH3BP1
NCBP2AS2
NCBP2
FBXL14
ARHGEF16
PFKL
PPM1J
FGF19
C5orf63
PLIN2
CACHD1
FLNC
LRP4
DHRS3
PPP1R13B
DBH
LPIN1
ARPC1B
R3HCC1
ODF3L2
COMMD7
DLL4
TNFRSF19
ZNF827
SPSB3
MRPS34
EME2
LITAF
RGSL1
RFX4
SLC39A7
RXRB
HSD17B8
COL11A2
EPM2A
CTNNB1
MAPK12
DYRK1B
EDN2
KMT5A
SLC50A1
EFNA1
RBP1
COQ10A
ANKRD52
ARRB2
METTL24
MACROH2A1
SEPHS2
MCPH1
PPP1R1A
ZNF593
C1orf232
S100A16
S100A14
EMP2
FXYD4
SQSTM1
DUSP9
PITPNM2
ZAP70
NR5A2
COLGALT1
GFI1B
TSC1
MAB21L4
VOPP1
HMX3
CD160
FGR
DCP1A
ZDHHC1
ANP32A
EFCAB14
ZNF792
WDHD1
SOCS4
GALNT9
TTLL6
RASGRP2
TNRC18
LOC100129484
MAPK15
GAD1
TATDN3
NSL1
MPP2
PYGM
FZD7
PANK4
HES5
ROBO3
ZNF44
ATP2A1
TBC1D14
DOK7
CCDC88B
ANK3
POU5F1
DUSP10
MYH11
CACNA1H
TRH
SPIB
MAP6
RAB3IL1
COL1A1
ST18
TNNC1
NISCH
ADAR
RCOR2
SEMA3G
STN1
ABHD12
ZMIZ2
C22orf39
TCF20
PHLDB1
ZNF615
TMEM123
SPIRE2
ABCB5
TSPAN14
TRNP1
TSPAN31
VAMP8
AGAP2
ZNF639
PPP1R16B
ASB2
ZACN
SRP68
GALR2
ADAMTS2
KLF6
SUN2
CPB1
SIAH1
ZC3HC1
SPIN1
NFAM1
RPRM
C7orf33
FGF4
VANGL2
SLC26A11
SGSH
SNRK
GPR108
TRIP10
FOXA3
MBD2
AURKAIP1
TTYH1
DCAF10
HSBP1
STRN
CPNE6
ANKDD1A
OLFML2A
NR6A1
CLEC18B
EBF2
CACNA1D
SZT2
MED8
DRG2
WDR86
SORBS1
MTSS2
RASL10A
GAS2L1
RAD54L2
NEK2
PLCH2
PCCA
BACE2
TYR
CRX
TLE3
SKIDA1
MLLT10
MLF2
ZNF79
NBPF12
UTS2B
CCDC50
TLE2
LDLRAP1
CIRBP
M6PR
KLRG1
RFLNA
RBM15
TAC4
PPM1H
ADAMTSL4
ISYNA1
MIDN
ATP5F1D
NRG1
TAFA3
FAM210B
ARHGEF4
PMAIP1
RAB5IF
NFILZ
PPP1R14B
C16orf95
UBAP1
IL24
ISCA1
PLCB3
ANTXRL
CLEC4C
NATD1
SLC2A14
ADA
ZNF496
RARB
STK11
TBC1D22A
LDB1
MYBL1
LOC101929372
BIN1
CRTC1
CPA1
PSMF1
MAN2C1
GYPC
INPP5K
FRG2
UBALD2
TCOF1
SDC4
FXR1
NYX
NOP14
GRK4
NMRK2
LMX1B
LMNA
SLC4A8
TRPM1
MEX3A
FAM120B
IDH1
GALNT6
DLL1
CTSC
BBC3
MAST3
IL12RB1
LAMB3
AP3B2
RBM20
PTP4A3
MFSD8
ABHD18
CHRNA1
RRP1
TRABD2A
DYRK3
GLI3
MCAM
CYB5R2
TMEM247
UNC5D
DDX3X
MELTF
SHH
GLIPR2
LRRC71
MTARC1
NRCAM
THRA
DENND4B
TNFSF15
GNAI2
VEZF1
DLX1
NGB
LCN8
LCN15
IQCC
DCDC2B
TMEM234
EIF3I
CCNDBP1
SERPINE1
SNAP47
JMJD4
TRAK1
NINJ2
PCLAF
TRIP4
DUSP12
MRPL39
NFIC
NFAT5
XPR1
DSC2
TBC1D8B
E2F1
GOLGA6A
ZSWIM8
CHCHD1
FUT11
CAMP
EOMES
DMPK
FUT10
CFAP298-TCP10L
CFAP298
MUC1
LRIG1
DNAJB1
SLC39A14
PHETA2
NAGA
SEPTIN6
NSD2
LETM1
KIF13B
NANOG
RCVRN
SMIM5
FASTKD1
KIF26A
ZBTB8OS
RBBP4
CNTFR
KDM2B
TTC13
SPAG8
HINT2
CHD4
FRMD1
PRKAG2
GSN
SCN1B
HPN
TRAPPC10
KIAA1522
TSPYL2
REST
C1R
SDF4
B3GALT6
C1QTNF12
LHX2
TAGLN3
GADD45G
MED9
LAMA5
TESMIN
CLUAP1
C16orf90
VCAN
CDC34
ZNF710
TBC1D19
ZNF598
PTK7
TUBB2B
MLLT6
SNX16
SLC25A22
CEND1
PKM
ADD1
DAPK2
C1QTNF4
C1orf216
PRDM14
PIANP
DGKZ
MAP2K7
OGFR
WNT1
FILIP1L
NKX1-1
CMSS1
BHLHA15
WNT10B
NEUROG2
ENPP3