ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039042 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◣ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2A
RABL2B
ZNF335
PSMD1
DUX4
MAPKAPK5
DYNC1LI2
NME6
ZNF503
TAOK3
SUDS3
PSMG2
CEP76
IPO13
POLR3F
DZANK1
CACTIN
VTI1B
NVL
NUP205
S1PR4
NCLN
TBCK
AIMP1
HADHB
HADHA
FAM187A
EFTUD2
CCDC103
NUP85
SRD5A1
RPL21
POLR2E
GPX4
TSNAX
DCTN1
RWDD1
REXO1
STAM2
MRPS7
MIF4GD
GGA3
HSPA9
ID2
FRG2C
HOXA1
HOXA2
VDAC2
SLC35B1
FARSB
SKP1
STAM
LYRM4
FARS2
EXOSC5
BCKDHA
GOSR2
S100A10
VARS1
BBS9
MRPS5
ZNF576
IRGQ
UPF2
RARB
TSN
PAK1IP1
C6orf52
PSMD12
RPS23
ATP6AP1L
DPH6
PDE6B
ATP5MG
DAPL1
GOLGA5
CAPRIN1
SFI1
EIF4ENIF1
C19orf48
RPL35A
IQCG
LMLN
SEC61B
ALG2
SMC2
TTC8
PES1
RBKS
BABAM2
SOAT2
IGFBP6
NNAT
BLCAP
TM9SF1
IPO4
TSSK4
COMMD1
CCT4
COX7A2L
PI4KB
RBBP5
PNO1
ACTR10
TMED1
SUPV3L1
NDUFA4
USP1
ZRANB2
SART3
ISCU
PKDCC
RBPJ
LYPD1
FAM104A
C17orf80
ANAPC7
PDAP1
BUD31
PIP4P1
OSGEP
APEX1
NFIA
ICE1
ADK
AP3M1
SELENOF
HS2ST1
RABGGTB
DNAJB7
XPNPEP3
ST13
PPP1R1B
IL23R
UFM1
SLC22A2
ZFHX3
FRG2
PROSER1
NHLRC3
RPS27A
CLHC1
SYBU
LOC102724770
DGCR6
CLGN
CBX4
HSPA1B
PCBP1
SCNN1A
LTBR
RPS12
PTK2B
C12orf50
C12orf29
ZGPAT
ARFRP1
ZNF608
LRRN4
CDC42EP3
CYP26A1
CREB5
MAGEA11
NEO1
PTGES2
METTL24
OPA3
SF3B3
COG4
PAF1
FOXP2
PXDNL
CCDC33
KCNN4
NSUN6
ARL5B
TLE2
PDE12
VANGL2
KCNIP4
BARHL2
CITED2
C6orf47
APOM
BAG6
MEOX1
NR2F1
USP29
HMGCS2
HEXIM2
RBMS3
CECR2
HOXB1
GATA4
GABRB2
MYRIP
CCNDBP1
HEY2
MRTO4
EMC1
SIRT4
GADD45GIP1
VIP
MBD2
OR6B2
NDUFA10
OTUD7B
METTL3
SALL2
RBFOX1
EIF2S3
ZFHX4
SCMH1
ACOT2
STON1-GTF2A1L
MTRNR2L1
RPS29
LRR1
SLC30A4
HBD
HBB
ST7
CA5A
BANP
ZNF585B
ZNF383
MSX2
DIAPH3
PDK1
ZNF746
POP5
ELF3
SUCLG1
ARHGEF10L
LAMA3
NEBL
HES1
CABIN1
CDC73
STIL
TMCC1
SEMA3E
ST18
ARHGEF38
TAAR2
SYNE2
TNK2
FAM118A
MAPK10
PDE4DIP
SKIL
NFKBIL1
DDX39B
ATP6V1G2
CCDC200
HMX2
BUB3
DMBX1
HAPLN1
LARP7
BNIP3
TPM1
RPL7
RDH10
TMEM107
LAMB1
EPHA8
HOXC4
HOXC6
HOXC8
HOXA3
HOXA4
HOXA5
PAH
ASCL1
CACYBP
TNRC18
PDHX
APIP
KAT6B
BHLHE40
TMEM9
MACROD2
GRHL1
CHODL
TBX2
SEC11C
ZBTB25
ZBTB1
LIN28A
RARA
TXNRD1
ANK3
FREM2
ARHGAP11A-SCG5
ARHGAP11A
TYRO3
ZNF407
PIN4
TBC1D9
IL12RB2
ZNF652
GORAB
MVB12A
BST2
OAZ3
MRPL9
FOXP1
FMN1
TTI2
KIF16B
CDS1
PCBD2
LCLAT1
CPB1
PCDH15
SLC25A6
MGP
RPP25
SMAGP
PRUNE2
SERTAD2
CNPY2
GTDC1
MKRN2OS
MKRN2
ARAP2
ARHGEF3
BAMBI
PLD5
ITGB8
SPCS1
GLT8D1
USP44
ALKBH5
TMC7
GTF3C4
DDX31
ZNF367
TCP10L
NDUFB3
FAM126B
FRRS1
MET
CNR1
EPM2A
SHOX2
RSRC1
CXXC4
ATOH1
GPR108
TRIP10
ZNF827
ERFL
RPS10-NUDT3
RPS10
USP17L13
CLDN14
USP17L17
USP17L15
OAS1
NDUFS7
SHMT2
TAF9
RAD17
AK6
RPN1
LYPD6B
ARF1
METRN
ANTKMT
GFRA1
SMURF1
LRRFIP2
ATG4C
PDZRN3
LMOD1
NLGN1
TNFRSF19
AGO1
ANK1
ZNF395
C6orf163
ETFBKMT
SCML4
ABCB4
CCDC59
CLECL1
KDM3A
INKA2
IL20
DNHD1
SPAG17
BCAS1
HCAR3
HCAR2
RBM20
RARG
SSPN
DONSON
ASXL3
MYZAP
GCOM1
TMEM242
TIGD1
EIF4E2
EVX2
CDH18
TMEM70
ELOC
GABRA6
MNT
SCAMP2
CLNK
ATP1B1
SPIN1
ZNF341
BNIP2
GEMIN2
MIER1
DNAI4
TMEM106B
KDM2B
ELOVL5
PRTG
ACKR3
SALL3
ID1
COL23A1
KRTAP23-1
SLITRK6
DHRS3
RAB11FIP1
MRPL34
DDA1
ABHD8
MAGEB3
MAGEB2
B3GNT5
EIF3D
ATP13A3
MEIS2
EFNB2
ABLIM3
SNCG
MMRN2
MYO1B
PKIG
POGLUT3
DIPK1A
NDST3
DENR
ZASP
SAP25
SLC25A53
FAM199X
HAND1
OTX1
CFAP69
SCOC
STK36
RNF25
COMMD10
CADM3
KMT2A
PTCH1
MAPRE1
TMPRSS11F
RPS24
POLR3A
PRDM10
LIX1
MCU
TFAP2B
REC8
RUNX1T1
UNC93A
SOX14
PARD3B
GGA1
ELOVL6
ATXN2
PEX14
DFFA
ARSF
LMO1
ACOT1
ITGAV
TEX2
NEFH
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RPL22
RNF207
SEPTIN2
HDLBP
REL
IPMK
CISD1
ECEL1
BRWD1
BDP1
OSGIN2
COX5A
IGF2BP3
ACSS3
KAT6A
ANGPT1
NELFA
RABGAP1L
BCAT2
CTF1
BCL7C
SLAMF8
SYTL1
FGD3
BTNL9
SFRP2
UNKL
C16orf91
MMD
SEMA6D
ZNF397
NXPH4
USP34
RGS8
APLN
KDM6B
SHB
KMT2E
RIN2
LYPD6
STATH
ADM
KLRC3
UBE2I
GJA10
PLCH1
TSPAN3
MAB21L2
CALM2
H2BC5
H1-4
IL17B
ABAT
C1orf105
ZBTB40
ZNF385B
PIGC
NKX2-6
ABI2
AFAP1
DOT1L
LCA5
AP3D1
VPS33B
LOC389199
ARHGAP10
HUS1
RPLP1
ANAPC15
LYN
ADAMTSL4
ZADH2
TSHZ1
EOMES
PDHB
MYADM
TCF7
PRKD1
IGFBP2
SMARCD2
SVOPL
KLF5
RBBP8NL
SIGLEC15
CLDN9
CLDN6
DNMBP
ACOT6
SPATC1L
ARID3C
DCTN3
EMP3
DNAJB1
KCNK2
CCDC174
DACT2
ANKRD6
MLIP
ILF3
PHIP
ZNF507
BOD1L2
CS
PDE4D
YTHDF2
IMMP1L
ELP4
MIGA1
MRPL52
SLC7A7
CRABP2
SLC2A9
SIGIRR
THOC6
HCFC1R1
BICDL2
PHC2
PXMP2
POLE
GFI1B
TSC1
STX19
KANSL3
FER1L5
SRSF11
LRRC40
NKX1-1
NRXN1
ATXN1L
PHB2
PCLO
NT5C2
KRT18
ACY3
CPNE6
TRPM7
TPRA1
MCM2
TACC1
CIPC
ATXN7
EBAG9
STARD13
IFI16
PYDC5
OTUD4
ZBTB17
SSBP2
BEND7
SYNJ2BP-COX16
SYNJ2BP
CLCN3
ACYP1
ZC2HC1C
NEK1
RNF10
COQ5
HSPA4L
GARRE1
RYR2
RPL34
LMO4
ADGRL2
UFSP1
ACHE
DUSP9
DMAC1
FAT2
TBX3
GADD45A
EIF4H
PDCL3
CCL28
LOC100287896
LIPT2
TMTC3
CEP290
CTNNB1
KCNC3
DDAH1
CCN1
USP17L21
USP17L20
USP17L12
USP17L22
PAX6
NR2C2
MGST1
CBWD5
CBWD3
CBWD6
AMBN
HNRNPD
KANK1
ZDHHC17
SERHL2
ACBD6
RILPL1
ACTR3B
EXOC2
CDKL2
QPRT
ZNF157
FAM168B
RPRM
VPS26C
POU2F1
DLAT
SATB2
TMSB4Y
TMPRSS12
SH2B1
VSIR
HNRNPA2B1
CBX3
MTF2
NBEA
MAB21L1
UROS
BCCIP
FGD5
ANO1
VEPH1
PRKAG2
CYP51A1
CDK20
SLC40A1
TLE4
COL21A1
DAG1
GTF2IRD2B
KCNH1
NEUROG1
PPFIBP2
SORBS2
TANC2
HOXD3
LSM8
YEATS2
SMUG1
TMEM259
CNN2
SLC10A5
IMPA1
TAP1
PSMB9
PRR13
KLHL32
MELTF
PLOD2
SELENOS
KCNS3
TMPPE
GLB1
RASSF4
BICRA
CEP70
TIPIN
MEMO1
GOLIM4
GPRC5A
EML5
BCAS2
TCHP
JAK1
RASSF6
CCNC
FANCL
RALB
BAG2
KCNN2
MTMR10
GRIN2C
RTL6
FZD8
URM1
POLR2J3
TAF1A
C2CD5
GGH
STX18
PCTP
PEX2
PRXL2A
NCBP3
NRDE2
ZNF3
COPS6
TMEM270
MTMR2
CHD7
MPP5
METTL27
PTGES3
DIO2
SFT2D2
PSMB5
CCDC102A
ADGRG5
RFPL1
CNOT10
ZEB2
PXYLP1
ZBED9
TNS3
UBE2V2
TCF4
SNX3
BIRC6
RAB11FIP3
EID2B
EID2
GPR37
ID3
FRMD7
SPECC1
PHACTR2
ARHGAP17
SPRR2F
EPHA6
NEUROG2
RIMS1
CYB561D1
ATXN7L2
PIP4K2B
SLC5A10
PALLD
FILIP1L
CMSS1
SULF1
LOC102723360
EYA1
PARP4
LMNTD1
SLC36A4
USP12
PPP1R12B
PLIN2
HMGA1
TSHZ2
COLEC12
FAM110A
SND1
PLEKHD1
NEK3
C6orf136
RAB11FIP2
TAF12
CMTR1
FRMD4A
ZNF384
TPCN1
TBC1D5
PLS1
RTN4IP1
QRSL1
SULT1A1
CAPZA2
BCAP29
RYBP
ABHD12
EFCAB2
TTK
GINS1
ARHGEF5
OTOL1
USP17L11
USP17L18
USP17L10
SPP1
GATA6
IFT22
SCAP
PELI2
VWA8
LRRTM4
SBF2
ZNF697
RAI14
PPP2R5A
ZSCAN12
PPP1R13B
INPP5A
CRPPA
TXNDC11
CATSPERG
KMT5C
HMCN2
EXPH5
NTAN1
ARL14EP
DRAM1
NUTM2E
TMEM167B
FAM162A
CCDC58
EIF5
MRPS36
SRSF10
PIGU
WDR11
ERCC6L2
OR5A2
CEP41
FDFT1
CARD10
SEMA4B
RHOBTB1
CA12
NR2F6
FSTL3
PIK3R1
C15orf61
ADAMTS7
RAPGEF3
SLC48A1
KIF22
ZG16
EAPP
NR2C1
MARCHF6
CRKL
MGST2
ANKRD36C
JMJD1C
GDF6
ATP6V0A4
NT5DC3
RPS5
NEUROG3
MTRNR2L2
MSH3
DHFR
MTRNR2L8
ICMT
HES3
WNT1
DUSP29
CDX2
SP2
MBTPS1
ARID3B
GLRA1
VEZT
FGD6
SNAPC1
NFE2
PLAGL1
PMAIP1
G6PC2
IER3
FLOT1
CBFA2T2
PALM2AKAP2
H2BU1
H2AW
DUSP6
NEUROD1
ZSWIM1
SPATA25
NEURL2
ZNF775
MUC20
ZP4
SERINC5
DPP9
LZTS1
TBL2
CTSA
ERCC1
TLE3
TRIM65
LEFTY2
PCGF1
LBX1
AQP6
MRPL38
ERRFI1
LBX2
WDR74
STX5
PHOX2B
MAMDC2
ARHGDIA
INSM1
ASB2
ETS1
P4HB
PPP1R35
NBEAL2
CCDC12
CDCA7L
TEPSIN
NDUFAF8
FAM222A
LPIN1
DNM2
MLEC
ARHGAP24
FGF19
SP1
SLC39A7