ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX17639402 | NB-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◣ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

CCL26
MTRNR2L1
CEBPE
TBL2
ASB2
DUX4
RARB
SMG6
DHRS3
ANGPTL4
EIF1B
STING1
C16orf54
ZNF595
MTRNR2L8
C10orf105
IER3
FLOT1
ZGPAT
ARFRP1
ZNF775
CSF3R
SMIM35
ARL14EPL
PITPNM2
ALOX5AP
ZNF414
SPI1
MAMDC2
KANSL3
FER1L5
ICAM1
LYST
CYP4F3
SLC2A5
COL23A1
GH1
CSHL1
LAMB3
PHRF1
BEAN1
SMUG1
CPSF4L
SMIM20
NAA10
ARHGAP4
APBB1IP
RARG
PRAM1
PPCDC
PTGES
RHBDL3
CCL2
ID1
SPDYE9
SPDYE8
SPDYE15
SPDYE13
SPDYE11
GFOD1
AGO1
DPEP2
DPEP3
GHRL
PLEKHO1
TRNP1
ART1
EXOSC4
GPAA1
CYP26A1
MTRNR2L2
MSH3
DHFR
TREM1
PIK3CG
KAT6B
LRTM2
SHISAL2A
FRG2
LMLN2
FRG2C
INAVA
FGR
S1PR2
AP5B1
IRF9
TANK
SERPINB1
SOAT2
IGFBP6
FFAR2
KAZALD1
SUCNR1
SCUBE1
SIGIRR
PKM
HCRT
KCNH4
KMT5A
RNF166
CTU2
CTBP2
HPCAL1
CXXC5
SH2B1
MYEOV
SPAAR
HRCT1
SKIL
SNX15
MUC3A
B4GALNT3
RDH12
RDH11
NPEPL1
COL4A2-AS2
CFLAR
PDE12
MYADM
PPP1R14B
VEGFB
LOC114841035
FKBP2
CCNDBP1
RGS19
OPRL1
LKAAEAR1
ITGA5
INPP1
MACC1
CD79A
WIZ
DNAH1
CCDC200
TRIB1
GPR35
CD53
SSBP4
EGR1
BPI
TOX2
ZNF335
RABL2B
RABL2A
PSMD1
RWDD1
MAPKAPK5
TAOK3
SUDS3
NME6
CACTIN
NUP85
POLR3F
DZANK1
FAM187A
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
POLR2E
GPX4
VDAC2
HSPA9
GOSR2
VTI1B
PSMG2
CEP76
NUP205
MRPS7
MIF4GD
GGA3
HADHB
HADHA
RPL21
S1PR4
REXO1
NCLN
TBCK
AIMP1
EXOSC5
BCKDHA
C19orf48
NNAT
BLCAP
DCTN1
TSNAX
STAM
ATP5MG
SLC35B1
TSN
STAM2
SEC61B
ALG2
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
PNO1
PES1
PAK1IP1
C6orf52
RBBP5
UPF2
SKP1
ZNF576
IRGQ
NDUFA4
LOC102724770
DGCR6
ZNF503
COX7A2L
CAPRIN1
SART3
ISCU
ACTR10
RBKS
BABAM2
ZRANB2
DPH6
TTC8
GOLGA5
SUPV3L1
RPL35A
IQCG
VARS1
PI4KB
LMLN
TMED1
RPS23
ATP6AP1L
RPS12
SMC2
ANAPC7
MRPS5
FAM104A
C17orf80
SELENOF
HS2ST1
RABGGTB
PCBP1
USP1
PDAP1
BUD31
HSPA1B
SFI1
EIF4ENIF1
UFM1
ADK
DNAJB7
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
C6orf47
APOM
BAG6
PROSER1
NHLRC3
PIP4P1
COMMD1
OSGEP
APEX1
CCT4
SF3B3
COG4
PAF1
TM9SF1
IPO4
RPS29
NEUROG2
TSSK4
NFKBIL1
DDX39B
ATP6V1G2
PPP1R1B
PDE6B
LRR1
NEUROG3
PTGES2
HES1
HOXA3
ZNF608
PIN4
OR6B2
NDUFA10
SUCLG1
OAZ3
MRPL9
UBE2I
ARF1
ICMT
HES3
HOXA4
WNT1
HOXA1
DUSP29
ARHGAP11A-SCG5
ARHGAP11A
CDX2
TAF9
RAD17
AK6
STK36
RNF25
SP2
EAPP
MBTPS1
MRTO4
EMC1
RARA
ARID3B
GLRA1
LARP7
SPATC1L
BICRA
VEZT
FGD6
SNAPC1
FZD8
UNKL
ID2
ARHGAP10
SEC11C
RPL7
RDH10
EIF2S3
GADD45GIP1
CDC73
NFE2
SYBU
NR2F1
C16orf91
PLAGL1
PMAIP1
G6PC2
CBFA2T2
CCDC33
HOXA2
PALM2AKAP2
H2BU1
H2AW
TMEM107
DUSP6
RPN1
GORAB
NDUFS7
NEUROD1
ZSWIM1
SPATA25
NEURL2
GTF3C4
DDX31
MUC20
ZP4
SERINC5
KCNN4
NEUROG1
ATOH1
RAB11FIP1
CNPY2
IGFBP2
DPP9
LZTS1
TLE4
CTSA
ERCC1
ZFHX4
BNIP3
USP29
GPR108
TPM1
BHLHE40
TLE3
TRIM65
ZNF585B
ZNF383
LEFTY2
BBS9
PCGF1
TRIP10
LBX1
AQP6
CDH18
MRPL38
SPCS1
GLT8D1
PDHX
APIP
FOXP1
ERRFI1
DDAH1
LBX2
VSIR
WDR74
STX5
PHOX2B
HOXB1
TTI2
METTL24
LIN28A
ST18
RUNX1T1
HOXA5
TBX3
ARHGDIA
PHC2
TLE2
INSM1
ETS1
ZNF746
P4HB
PPP1R35
NBEAL2
CCDC12
CDCA7L
TEPSIN
NDUFAF8
FAM222A
PCBD2
TAF12
LPIN1
DNM2
MLEC
DAPL1
ARHGAP24
ARID3C
FGF19
TPRA1
PAH
MCM2
CITED2
SP1
SLC39A7
RXRB
HSD17B8
TBX2
ANKLE2
HOXB3
ALKBH5
NHS
S100A10
URM1
FBXO31
NPAS4
DLL4
RHBDD3
EWSR1
ADNP2
NCOA7
HOXC4
MINDY2
HPD
SP5
PRUNE2
TNFRSF19
MAP1LC3B
HUS1
SYTL3
CS
CRABP2
PPP6R3
FILIP1L
ANKRD28
DCTN3
H2BC17
H2AC17
RPS10-NUDT3
RPS10
COL11A2
TMEM70
ELOC
UNCX
SYNPO
CCN1
PDE4D
EXOC2
XKR7
FRA10AC1
PDHB
CALCOCO1
RPL22
RNF207
RAB5B
PMEL
CDK2
FXYD2
AXDND1
E4F1
SMAD3
CNTN1
KIF21B
ZFHX3
ANK2
MRPL34
DDA1
ABHD8
PKDCC
NFIA
BAZ2A
CLGN
STX18
ARHGEF28
CHN2
HOXC6
FABP7
KDM6B
CAMTA1
FRYL
TLE1
STAP2
ITGB6
ID3
CPVL
OTUD7B
TMEM120B
ARSG
TMEM242
DLX4
BAIAP2
VIP
PPFIBP2
DYNLT1
DONSON
DOLPP1
GPC6
KDM2B
ARRDC4
ASB6
RPS24
POLR3A
PDZRN3
PGK1
ATP5F1B
ABLIM3
SEPTIN9
ATF6
CERCAM
MAB21L2
ETAA1
FOXP2
POR
CERK
POP5
RBPJ
CADM3
MSX1
SIRT4
SH3BP2
JUP
NELFA
MFSD10
UPF3A
PRRX1
SMPDL3A
ARHGAP22
MRPL20
PC
NINJ2
RHBDD1
BCL3
KATNB1
QPRT
PANK2
PTK2B
SQSTM1
KCNAB2
SHC1
TMEM101
CCDC174
RING1
MYLK4
MEIS2
SRSF11
ABHD2
CCNL2
ABCC10
IRF2BP2
SREBF1
MBNL3
ADAP1
ZNF687
SMARCD2
BMF
RFX1
CLCN3
SMIM28
MTMR4
LFNG
TMEM9
GATA4
ATP1A1
MALRD1
DACT2
GPCPD1
NBPF1
ZFP36
PLEKHG2
CNOT2
CBX5
MIDEAS
MRPL3
USP17L21
USP17L20
USP17L12
TRIM46
KRTCAP2
SLX1B
SLX1A
BOLA2B
BOLA2
NRL
C9orf92
ZNF367
PCGF2
RNF34
TOP2A
PRKAG2
CALM2
RASSF5
SLC2A9
SPG7
PSPN
ALKBH7
TLX2
SOCS3
NOL4L
HSPA1L
HSPA1A
HEXIM2
INHBE
GLI1
ANKHD1-EIF4EBP3
ANKHD1
PPP1R18
NRM
MRPS31
HNRNPA2B1
CBX3
LRRC40
FURIN
NUBP1
THOP1
SGTA
SACM1L
RABGAP1L
KAT7
DLG2
TRAF7
DLC1
USP17L22
RHOQ
ATP6V1E2
PCNA
ITGAV
RPL34
ECEL1
STAT1
CRYAA2
CRYAA
BAHCC1
NFKBIA
NOTCH2
RPLP1
ASXL3
ARHGAP30
IQSEC3
RAB26
POLDIP3
NR2F6
RNF103-CHMP3
RMND5A
HNMT
DCAF11
ZFAND2A
PDE4DIP
TRIM26
ZNF740
CSAD
PXYLP1
PRDM10
NAV3
CDS2
ARRDC2
ASCL1
GTF3A
OSBP
NLK
GRIK2
ATP1B1
GPR20
SHF
EIF2AK3
SKI
ZNF77
IL17RD
STIP1
RPS7
HMGCS1
PSMD6
SOD2
AHDC1
SERPINE1
LRATD2
STARD13
CLDN11
DSCAML1
TCP10L
TRIM7
HAND1
RGS3
SLC25A25
SEPTIN4
ZC3H3
RAB37
ECE1
MDM2
GADD45G
SLC45A4
RAB11B
CAPG
ME3
KNL1
BRMS1
RBBP7
ACYP1
CAPNS2
TRIB3
GADD45A
G3BP1
ZNF564
MYBPC3
LPCAT3
IKBKB
NCOA2
BORCS6
HOXB4
EVI5L
GOT1
SPRED2
KDM8
RTN4
PIPOX
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
MACROH2A1
EMP3
FTL
SOCS2
ELL
SH2D6
CBX4
RGS12
HNRNPD
LMO4
RBM15
STX1A
TNFAIP2
POLG
METRN
COL21A1
CTSW
ADM
SLC35E2B
FAM107B
PDP2
TPCN1
TCTEX1D4
SLC7A5
PLK3
BTBD19
CRLS1
ZNF827
SYNJ2
GRSF1
B4GAT1
SCGB1A1
METTL3
LIG3
LMOD1
EVA1A
CORO1A
TCF7L2
HTR1F
MYRIP
MTF2
MBD6
DDIT3
MIDN
PNKD
METTL11B
RBFOX2
MNT
ZC2HC1C
KBTBD11
MOB3A
IZUMO4
TRIM2
MSX2
GLRX5
ANTKMT
NEK1
CP
CLDN9
PKN2
FST
DAGLB
JUNB
RFX2
GMEB2
WSB2
SLC6A12
SCHIP1
HOXD3
LCK
FAM167B
TMEM94
PYGL
CSNK1D
NAIF1
PLA2G2A
BFSP1
TUBA1C
SEC22B
CNKSR3
IFI16
ARHGEF3
UBE2F
CCDC43
TMEM212
SHB
ETF1
ARAP1
KDM3A
SORL1
NCDN
KIAA0319L
PRMT5
NEK3
MRPS28
EIF3D
TLN1
SLC30A4
CREB3
ARID5A
NKX1-1
IGFBP7
CNPY3
NKD1
TESC
MPND
UNC5A
NAV2
SH3YL1
ACP1
FLAD1
CKS1B
SLC19A1
H3C12
KIAA1549
ABCA4
SH3BP1
FOXA3
PCM1
SCARB1
BCAR3
DIABLO
PPFIBP1
CMSS1
TACC1
TXNRD1
SPOCK2
LINGO1
ARID4A
SORBS2
KLF16
LMNA
ZBTB18
SIT1
H4C15
H4C14
H3C15
H3C14
NAGLU
PLEC
UBC
CHODL
LRRC45
CENPX
CYP51A1
COX5A
MRS2
RGS5
RIMKLB
MMD
RNF144A
HNRNPL
METTL26
SNCG
MMRN2
ENPP3
PGP
SEC14L1
NRCAM
LRCH4
FBXO24
LNPEP
INKA2
CACNA1D
MYO1B
SEBOX
ARID2
DMD
HMGB1
CHGA
UACA
BAX
NCS1
RXRA
RNPEPL1
DUSP28
ANKMY1
CEP41
NR1D1
CIC
FRMD3
INAFM2
BOLA2-SMG1P6
RPS6KA1
RNF149
UGP2
NRXN1
ATP6V1G3
CSRNP1
PECAM1
ETFBKMT
ITGB2
KMT2A
LOC102724265
CAND1
LIMA1
FRAT2
KIF3B
CPT1A
C5orf63
SMIM22
ROGDI
DNAJB3
SCNN1A
LTBR
CCDC38
AMDHD1
OTX1
SLA
KIAA0319
IL23R
PHB
KIF5C
STX16
HNRNPAB
NDUFV2
PRR14
FBRS
CCDC59
NOXO1
CCDC107
ARHGEF39
MRPS24
ANKRD39
DMBX1
SLC34A3
TRDMT1
LAPTM5
ARHGEF10L
HOXC5
HTR5A
CREB5
TES
PHETA1
NEDD9
TSHZ3
KCTD7
EFEMP2
GATA6
TCHP
RAC1
PSMB5
ZBTB45
OPLAH
INSM2
EIF4H