ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9607666 | NTERA-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◣ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

H2BU1
H2AW
ADCY1
GPR35
DRD4
ARHGAP30
ZGPAT
ARFRP1
VIPR2
SOAT2
IGFBP6
CARM1
LINGO4
VPS4A
DYSF
CLEC4G
MUC20
TRABD
ATP6V1B1
OTP
LMOD1
KIF21B
RFLNA
MAP3K6
FCN3
NR2F6
ELMO3
PRSS47
LFNG
CYP1A1
KCNJ4
FOXK1
CRYAA2
CRYAA
PLEKHN1
PERM1
GALP
CRLF1
TMEM59L
SLC16A8
NFKBID
PDCD1
LTBP3
TMEM250
EXOC2
KLF16
SPIB
LINGO1
LRRC20
CYP26A1
MLPH
SH3D21
RPS6KA4
HPD
CDX1
DUX4
LDB3
GJB6
CLEC18B
SCARB1
BIRC7
PLEKHA6
IGFBP5
ZNF746
SFXN3
PDZD7
AGO1
TCTEX1D4
PLK3
BTBD19
CDKN2C
NAT8L
MYBPC3
SERPINF2
SPN
INHBE
GLI1
EVA1C
PHC2
SH3BP2
CCDC120
ADGRA2
MCOLN1
PNPLA6
RASSF7
LMNTD2
DAPK2
TRIM46
KRTCAP2
NODAL
MAPK15
FOXL2NB
FOXL2
WIZ
CATSPER4
MSLN
SSBP4
BAHCC1
INPP5B
TRMT112
PRDX5
LEFTY2
STUB1
RHBDL1
RHOT2
TYROBP
HCST
SH3BP4
GET3
BEST2
METTL11B
SSTR5
PSMG3
MYL10
ITGB2
BHLHA15
FAM207A
POLD1
HOXB1
C22orf31
ZNF79
SERPINB9
TMEM88B
VWA1
STAB1
ADAMTSL5
KMT5C
NAPSA
RIPOR1
KRTAP12-1
METTL26
WFIKKN1
TIMM22
NXN
SKIL
GABRB2
TNFRSF6B
ARHGAP33
ZBTB46
CADPS
ERCC1
COL4A2-AS2
SLC39A7
RXRB
HSD17B8
COL11A2
PKDCC
TPPP3
SPRYD3
KCNQ4
TTYH3
PLD2
DNAJB5
KCNJ10
ROBO3
ARRB1
CCL26
SHANK2
LAPTM5
NUP93
PAX7
C7orf33
BMF
ADAM11
PPP1R14B
PLCB3
N4BP3
SDF4
B3GALT6
C1QTNF12
MDM2
PDE6B
CPLX1
TMEM63A
FBXO41
EGR4
RCC1
ZBTB38
HTR6
SH3PXD2A
PCGF1
TPRA1
MCM2
TLX2
UBALD2
SLC19A1
RASGRP2
PYGM
RUNX3
DLX5
CCDC88B
FAM222A
LEFTY1
CDK18
COX5A
SH2B1
EXTL1
SMIM35
PCDH1
LAMB2
SOCS3
GPR20
KRTAP10-12
LHX4
PPP1R35
FOXA3
UNKL
C16orf91
GRWD1
PLPP2
TRPV4
SERPINB6
NFASC
NBEAL2
CCDC12
KCNF1
ADAMTS2
LZTFL1
PRELID3B
APOBEC3G
ASB6
LAMA5
TRIM56
CRABP2
RNF224
RNF208
CYSRT1
PTK6
HIRIP3
SCYL1
ATP2A1
PSAPL1
TNNC1
NISCH
SEMA3G
ZSWIM1
SPATA25
NEURL2
CTSA
BRI3
JUNB
PRDX2
PDGFA
KCNN4
LY6E
PDE12
SLC6A12
ANKRD39
TCF20
ANKRD23
SH2D6
DNAH1
DIPK1B
YPEL3
TBX6
SH2B2
CRELD1
APOBEC3D
APOBEC3C
GPC6
MEGF8
USP3
ODF3L2
SPRED2
HDAC4
CACNA1G
PDE2A
CASD1
PMEPA1
GPER1
SLC12A9
EPHB4
CECR2
SNCG
MMRN2
FGF6
HS6ST1
RUNX1T1
ZNF740
CSAD
SYTL1
BCL7A
WHRN
METRN
ANTKMT
GALNT2
DCAF12
RCVRN
SERPINE1
CD19
EVPL
LSP1
AHSP
CD7
CRISPLD2
LIMK1
DBH
ARPC1B
PANK2
SLC26A11
SGSH
LIF
GPR108
TRIP10
NGFR
MACF1
MAP11
LAMTOR4
TBX10
NUDT8
FXYD3
FBLN2
NUP210L
SPATA31A6
CRYBG2
MAST3
IL12RB1
ATP2B2
PKNOX2
RIC8B
ATP6V0A4
STEAP3
FAM110D
SLC25A6
GLIS2
HPDL
MTRNR2L1
SLC2A9
EIF4A2
INHBB
FGF4
KLHL26
CHN2
CPVL
PLCB2
ADAMTS9
AHDC1
ITM2C
AQP3
SLC34A3
PRAM1
TRABD2A
CBFA2T3
AKIRIN1
SULT1A1
SH3PXD2B
CRIP2
MPPED1
PCBP4
GPR62
CYP26C1
TST
MPST
C15orf39
VIL1
SEMA4G
TTC7A
MCFD2
NFAM1
ATF3
ZMIZ2
SOX1
CEACAM1
TRAPPC3
MAP7D1
ACOT4
SPATA31A7
SPATA31A5
ARL8A
CASKIN1
A4GALT
PLXNB2
TRIL
MNX1
PFKL
MAPKAPK2
CPB1
GAMT
FAM131B
DYRK3
MTSS2
CLEC18A
TCF7
ANKRD33
FRMD1
KCNN3
PHB2
ARHGEF16
GATD3B
GATD3A
CAMKK1
KIF19
LHX6
PIK3CG
RIPOR3
HOXC4
MBD2
CARD14
FAM228B
SF3B6
USO1
TP53I3
TCEA2
IFNLR1
CARMIL3
NECTIN4
NCS1
CDC34
RCOR2
DPEP2
DPEP3
CCDC22
CACNA1F
TAC4
GBX2
FOXO6
GCK
PRR5
PRR5-ARHGAP8
ADAMTSL4
ITFG2
CORO6
YJEFN3
SNED1
CERCAM
ELF3
CITED4
GALNT9
GAL3ST2
LOC105376731
SLC22A17
EFS
SDSL
SDS
RPS8
ZNF554
DMPK
CYB5R2
OTOF
FAM166C
MAMDC2
CPE
CTDSP2
GRM4
ORMDL3
GSDMB
TRIM8
GPIHBP1
MXRA8
TAF1C
C1QTNF4
ADAD2
UCKL1
INPP5K
RNASEK
FSCN1
C17orf49
BCL6B
MTRNR2L8
MINDY2
ARRDC2
OTX1
TLN1
CREB3
CIRBP
SLC45A3
LMF1
SOX8
MIDEAS
LYST
ADGRA1
SPACA6
SOX5
HAPLN3
LDLRAP1
IL24
CHCHD10
C22orf15
CNOT2
LARP1
THEM5
PITPNM2
RHOC
TCEA3
MS4A4A
CEP295NL
RARB
DHDDS
ZDHHC19
SLC51A
LITAF
SPATA31A1
RBKS
BABAM2
PRTG
EPHB3
C16orf95
GPR162
SIM2
P3H3
PCTP
GUCA2A
KRBA1
AP1B1
COMMD7
SHANK1
CLEC11A
YWHAE
GNB1
TEAD4
SPATS2L
SKIDA1
MLLT10
HEY2
OAF
CFAP20DC
LGR6
TDRD10
SHE
DLL4
DUSP23
LOC102724770
DGCR6
ZFHX3
DLC1
MYEOV
NR2C1
LRIG1
WDR18
LIN28A
WBP1L
HOXA1
DONSON
HECTD4
SLC15A3
GYPC
MYH11
POLR2H
CLCN2
MCF2L
CCDC33
TBC1D14
NRSN2
CPA1
ATP8B3
ZC3HC1
MYRF
SULT2B1
CHRNA4
SULF2
PGF
MAB21L4
SNX12
ZBED4
LHCGR
COX6B2
PPCDC
FGR
PLCH2
ANTXRL
PALD1
THEG
ZNF615
HUS1
TSPAN31
AGAP2
MRPS2
C9orf116
RBBP8NL
KCNJ12
KLK7
TLE1
FAM174C
EFNA2
PPM1M
TWF2
MAPK12
HDAC10
APC2
FBLN1
TP53INP1
ANKDD1A
ANHX
B4GALT1
CST6
MDK
MEGF9
CRHR2
SF3A3
SVOPL
TIMP3
CSRNP1
DUSP4
CLDN2
R3HCC1
NR2C2
GAST
HEYL
CDC42EP2
RBP1
NPM2
KDM6B
YIF1B
KCNK6
DOK7
SCN1B
HPN
UPK3B
CD160
SLC39A14
WNT2B
HAL
LOC105372440
ACP4
PPP1R1A
CD2
CADM3
BRD2
SNX8
TBC1D1
B4GALT5
TSPAN18
C17orf113
CEBPE
TRNP1
CHST13
C10orf105
UROC1
ZNF254
RGSL1
PPP2R3A
NFE2
PHRF1
SPATA20
BOK
AIFM3
MTRNR2L2
MSH3
DHFR
CD244
TRIM7
FGF16
HOXB3
HOXB4
SDE2
NRARP
CHD7
HMX3
LOXL1
TNFSF15
MUC3A
KRT82
RPRM
SOCS2
DGKZ
NOP14
GRK4
TTYH2
CLEC4C
TBX1
ZFHX2
SPHK2
THRA
C16orf70
RPL18
FAM83E
AP5B1
RAB3IL1
OVOL1
SPACA4
SSNA1
ANAPC2
TPRN
TNP1
PRDM15
STN1
ASB1
PTGES3
MATN1
SLC25A22
CEND1
INHBA
GPR157
ARHGEF35
C1orf167
AQP7
KANSL3
FER1L5
HSBP1
MFSD12
UAP1L1
MAN1B1
STX18
MYCN
COL9A2
NUP188
DOLK
EMP2
SLPI
ANKRD28
ARHGEF3
FAM120B
ZNF593
C1orf232
TEX264
DLL1
KIAA0930
SLC50A1
EFNA1
RCAN1
DVL3
PPP1R26
SEPHS2
CXCR5
MTA3
NES
ZNF512B
SHH
UTS2R
LRRC3
ZPR1
APOA5
PPY
CYP26B1
MBD6
DDIT3
DUS1L
COQ10A
ANKRD52
ELFN2
C5orf63
OLFML2A
DAB2IP
NR6A1
TREX1
SHISA5
SMYD2
PLCD1
FOXE3
DLEC1
MEOX1
DMAP1
TMPRSS4
HELZ2
CORO2B
NFIC
LHX2
BGN
TXNIP
COL27A1
CHST8
RPRML
TTC7B
FTL
BAX
GDPD5
PPIA
TTLL10
SLC7A8
RARA
LOC102724265
AURKAIP1
APBA2
KIAA1522
SMARCD3
DNTT
SMIM5
PTPN6
SLC26A6
CDCA7L
RAB4B
CYBC1
MSI1
CELSR2
UPF3A
TMEM37
ADD1
NKX2-5
TMEM132B
VAV2
CHRNB3
IL17RD
LMNA
LIPE
MEX3A
MAP2K3
MYLK3
NKIRAS2
DNAJC7
CNTFR
FOXP1
QPRT
SRCAP
LOC730183
SLC51B
COL1A1
SPATA31A3
SBNO2
TNRC18
LOC100129484
TRMT9B
ADGRL1
ETV4
ZNF346
USP7
GPSM1
NUDT16L1
EDN3
NUF2
NEFH
OLFM4
DLX3
MEX3D
IGSF21
XKR7
NOL4L
PCGF3
SZT2
MED8
SUSD3
PGAP2
SLC41A1
DYRK4
GRIK3
SLC4A2
CDK5
ASIC3
HAP1
GARS1
BIRC6
SLC41A3
DUSP2
MAX
CCDC149
RBPMS2
FAM155B
RHOF
SETD1B
EGFL7
CYBA
TIMM13
TMEM39B
CDC25B
AP3B2
ATP1A3
LPCAT3
ATP1A4
KIF13B
MKNK1
MOB3C
LGALS2
RANGAP1
ZC3H7B
TJP3
MACROH2A2
S100A16
S100A14
TRAF7
PGP
CCND3
MLST8
BRICD5
CTSD
INTS10
FAM3B
RAVER1
ATP4A
MPP2
FCHO1
CRYBA1
SEMA7A
RGS16
CACNA1H
UQCRHL
SLC2A1
HRH3
DACT3
KLC3
CLDN9
CLDN6
CTSZ
NFAT5
CLIP1
NAALAD2
NINJ2
TTLL6
ALLC
ZNF710
PRKCZ
TRH
ZFHX4
PKM
SEMA5B
SIPA1
PFKFB4
UCN2
HSD11B2
CCDC57
FGFR1
PDE4C
ANXA8
NEK3
VOPP1
GSN
AFAP1
CRB2
LOC389199
POMGNT1
ECE1
LRMDA
BCL11B
HHIPL1
CCDC85C
VANGL1
ATN1
ABCB5
IKZF3
SSR4
IDH3G
ENO2
RSPO1
UFSP1
SRRT
ISCA1
LSR
USF2
CAPN13
FBXO31
SPAG8
HINT2
MAN2C1
SERPING1
MCPH1
GMIP
LPAR2
POLR2E
GPX4
SERTAD2
ZIC3
SERPINA10
AIFM2
TRAF2
RIN2
PIGM
CPT1B
THEM4
IQSEC2
CHKB
TNC
PALM
CORO7-PAM16
CORO7
OSTM1
IL17RB
CHDH
ANKRD9
CNR1
NFYC
LMNTD1
MXD4
ARHGEF5
TNF
LTA
ENTPD8
TNFRSF19
SLCO4A1
SDC4
FOXJ3
ITPRIPL2
GBA
SEMA6D
MYO18A
LDB1
TSPAN14
DNAI2
KRT24
ZNF385A
TTYH1
SLC30A4
PCCA
FAM169A
TMEM240
PRKAG2
NRCAM
MT2A
CD68
ARHGAP40
MPDU1
LOC100996842
CHD4
VENTX
FAM178B
NBPF15
UTF1
SOX15
WNT1
WNT10B
RSBN1L
SNAI1
NTRK1