ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8814876 | Neuroblastoma
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◣ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ATF6
RGS5
C9orf92
KIAA1549
COMTD1
GPR68
TBX2
ARHGAP22
ENOX1
HTR1F
CNKSR3
IKBKB
C6
KPNA4
ZNF804A
DAOA
HNMT
VSTM2A
AGBL3
HAPLN2
PPFIBP1
ARHGAP24
KCNJ6
PSMD6
HHAT
AADACL4
DGKB
RNF34
MCC
SPATA24
TBX3
MTRNR2L2
MSH3
DHFR
FRA10AC1
CCDC73
CBFA2T2
SEMA5B
TTC30B
MGAT5
KBTBD11
PDE3A
TEX101
CDC7
TGFBR3
CYP51A1
TNFSF15
ADAMTS18
RWDD1
VIP
CXCR4
CDK18
BMPR1B
COL21A1
GLYAT
ENPP7
IGFBP3
FGGY
SMIM30
FRMD3
ABCA12
HTR4
PRELID2
SPNS3
BMP5
PDZRN4
MUSK
PKIB
C1orf87
NR3C1
CRABP2
KCTD7
MARCOL
CD180
LCLAT1
TES
GASK1B
UGP2
MYRFL
CAMKK2
RBFOX3
TIAM1
TNFRSF19
SLC12A3
LAPTM4A
CLCN3
PPP1R1C
RMDN2
CDH18
IGFBP7
NT5DC1
MSRB2
INPP4B
BDNF
RDX
SCHIP1
KRT82
CPO
ZC3H3
FOLH1B
CNTN4
SMIM28
SDC3
KIAA0319
CDK6
QPRT
SCML4
TOX3
SLC16A7
LMO4
LEPR
APOL6
NUBPL
MYT1L
MARCHF11
PLAC8L1
FSHR
NELL1
AQP6
HABP2
PACRGL
OPRM1
PITPNB
FEZF2
MFSD6
RARB
MTRNR2L8
SYBU
KPNA5
NRP1
EHF
BEND4
FLRT3
TTLL6
DNAJC15
FAM228B
PFN4
TNIK
MAGEB3
MAGEB2
DIABLO
TSHZ3
RGS8
ABHD2
RERE
HAO1
KCNV1
FAM91A1
PTPRN2
MIER1
DNAI4
RERG
BANK1
CCDC172
CLMN
PTPRB
H3Y2
SAMSN1
TLE4
ARHGEF28
FYB2
CHRNA1
ADGRL2
SYTL3
DYNLT1
DCTD
PTPDC1
CCDC196
IGFBP5
TPH2
SLC28A3
GRIK2
HAND1
KIF3B
SRGAP3
KCTD8
MARVELD2
SLA
ACTA2
HS3ST5
GADD45A
PSME3IP1
RSPRY1
MMP15
CHGA
ANO3
TMTC2
NRXN3
RARA
PDHA2
THSD7A
TYRP1
CCDC178
PLAC1
ATP1A1
BIN1
DDAH1
DEFB130B
DEFB130A
OLFML1
CD200R1L
ZNF385B
UBXN7
NRXN1
COL3A1
PRCC
ZNF335
CILP
SH3RF2
IGDCC3
PDE4B
MTUS2
SAMD11
KCNMB4
MME
GCSAM
FILIP1L
LIMA1
CABCOCO1
ZFPM2
ANKFN1
EGLN3
PKDCC
C14orf93
SULF2
PIPOX
LINGO2
ZNF608
LMCD1
HPGD
PDZRN3
QRFPR
HS3ST3B1
HK1
GRWD1
KCNJ14
NRCAM
FAM184A
ATP8A1
PTPRE
PRPF40B
OLFM3
ROBO1
DLG2
SLC37A3
RAB19
ABCA4
DMD
PKHD1
CCKAR
GRK5
CRKL
LOC105378979
CELF2
GFRA3
NRP2
NRSN1
BTBD8
KRT6C
TMEM45A
RPL35A
IQCG
LMLN
C1orf185
ZNF148
PAM
MAN1A2
IL12A
PANK3
SPARCL1
ADAM23
PMFBP1
GBP4
MTRNR2L1
SH3D19
HPCAL1
OXR1
COL10A1
APCDD1L
SNX7
SETD7
C2orf83
FREM1
SORBS2
KREMEN1
PTPN20
SYT4
DCN
KIF5C
DOCK10
TRAF3IP2
DUSP23
PIK3CG
GK2
SPATA4
RGPD1
RGPD2
GSC
SGPL1
OGFRL1
PRKG1
RPS29
DNAAF2
ZMYM1
SULT1C4
FEZ2
ROBO2
LIPC
PHB
C9orf62
FDX1
WNT5A
ZNF3
COPS6
ELF5
POLR2E
GPX4
KAZN
PWWP3A
LGSN
PRLHR
EVPL
NBN
NID2
RNF111
GPR162
CSRNP3
CFC1
PTN
DCC
TXNRD1
PXYLP1
NOX3
KCNIP1
GOSR2
STARD13
CALM2
ADRB3
ABRA
TCAF2
CHODL
SERP2
GPR75-ASB3
GPR75
GAB2
SLC6A5
GAST
KANK4
SMUG1
JAM2
WT1
HSPA4L
TRDMT1
NCAM2
SESN1
CEP57L1
RABL2B
PCDH8
TNS3
GHITM
DRD3
TGFBI
GCNT7
FAM209A
PPP1R1B
CACHD1
SIPA1L2
MALRD1
PROKR1
UNC5A
OSR1
FAM187A
EFTUD2
CCDC103
N4BP3
PCDH9
VAV3
HCN3
CLK2
EXOSC5
BCKDHA
TPD52
DRGX
ACKR4
BCL2L14
MDFIC2
UBL4B
CDH12
LRRC18
KCNK2
RASD2
SGCE
PEG10
NECAB1
CLGN
ZADH2
TSHZ1
OSBP2
ETAA1
FAM205A
TVP23C
GFRAL
GYS2
DAPP1
CERK
IGFBPL1
MTUS1
RP1L1
SOX5
PLET1
SGCD
NBEA
MAB21L1
TIMELESS
ATP23
PTPN5
ARHGAP30
CHRDL2
COQ9
CIAPIN1
IFNL4
IFNL3
ZNF330
RABGGTB
MRTFA
PRG2
CADM2
TENM2
SNCAIP
KLHL1
PES1
MAGEB5
SKP2
LMBRD2
HIGD1C
ITGAV
LMO7
MRS2
CD74
TMED1
ID2
DUX4
CEP85L
SCG2
ACACB
AGTR1
PPARGC1A
PLPP3
PACSIN3
IRAK2
ZFHX3
KCNIP4
DNAH1
SCCPDH
LNPEP
ANKRD28
HADHB
HADHA
ARHGEF3
MTNR1A
FER
SYT16
CNTN5
EPYC
TAOK3
SUDS3
LPIN1
CNTN1
PCLO
FAM124A
PSPH
CCT6A
MYH15
CFAP126
SUPT20HL2
DOCK9
FGD5
TMEM17
JDP2
DOC2B
RABL2A
NACA2
APOH
NOD1
POU4F2
SYTL2
GPER1
NCR2
TRIM2
RFPL1
ZFHX4
FBXO34
DPYSL3
ELAVL4
SRSF10
TMEM107
C8B
SNX4
CAMK1D
FBXO30
LY86
SLC39A13
IZUMO1R
GLI3
SLIT1
CALHM5
MINDY3
KMT5A
SH2D4B
DIPK1A
MAB21L2
SLC19A1
MLH3
RBMXL1
KYAT3
LRRC43
OR10AD1
IL31
DAPL1
TRIB2
C2CD4C
AMOT
PLEKHA5
MLXIP
C10orf143
DCP1B
ST3GAL6
SH2D1A
COX7A2L
JUP
SSH1
RUFY4
LRIG3
VWA3B
UNC5C
CCSER2
RAB33A
MTRF1
NAA16
GABRG2
B3GNT4
TMEM229B
ARHGEF10L
RASL10B
ABCA1
RPS12
B3GNT3
SLC25A26
TUBE1
FAM229B
COLQ
C3orf85
METTL24
ENPP2
TMEM9
STAT1
SSR3
MAPK1
PCDH10
NCS1
BAMBI
CRYGB
SEC22B
EYS
RESF1
PLCL1
PIK3C2G
PCSK1
SIPA1L1
PCGF1
LBX2
TLX2
YY1AP1
DAP3
ADCY8
GPR19
TEAD1
RBFOX2
RIN2
MCHR1
GHRL
GSAP
NAV1
RIMS1
ARID5A
HNF4G
AGR3
GCHFR
RMDN3
UFM1
CAVIN4
FAM13C
OTOGL
OGFOD2
ARL6IP4
ABCB9
IQCJ-SCHIP1
IQCJ
PLXNA1
SLC11A1
SLC17A2
DLC1
RASL11A
IL24
DEGS2
OAZ3
MRPL9
GPR1
ARX
ATP6V1G3
FYN
RNF145
CHST1
LOC283710
MRPS7
MIF4GD
GGA3
HOXC4
MTNR1B
CDH4
CD28
FAM149A
ACYP1
TMCC3
CHST6
NKIRAS1
NR1D2
HSD17B12
TDO2
RAG1
ZNHIT6
RHOBTB2
APC
HDGFL1
HPD
PSMD9
MAD2L2
DRAXIN
ESRRG
NUP85
B3GAT1
GPR22
PAPOLB
USH2A
NALCN
FGF19
KCNQ5
IL17F
KCNN2
PDE5A
CLVS2
SMAD3
CLDN12
SMC3
SMTNL2
NFASC
RGS13
ZNF503
RBP1
RPS7
MAP1LC3B2
FOXN4
AMY2A
TSPAN31
DENR
MARCHF9
CDK4
LIPK
ZNF157
POLR1F
TTC39A
GTF3A
MYT1
ASB6
FICD
PRKG2
RXFP2
SBNO1
POTEI
CHRNA9
SART3
ISCU
PKNOX2
PPM1L
MLIP
HORMAD2
NAA11
TRPA1
STN1
CDY1B
CDY1
FFAR4
RPS23
ATP6AP1L
FAM107B
FMN1
LHFPL6
C3orf49
AGPAT4
PYGB
GLCCI1
GPR88
ERN1
AVIL
SEL1L3
SEC61B
ALG2
LRRN4
RBM20
MCCC1
MAPK10
NSMAF
SPART
CCDC33
DR1
KLHL32
C1QL3
FSTL4
ERVMER34-1
CCDC182
CACTIN
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
SLC37A1
RSPH1
DEFB136
IRX6
PARP14
CASD1
C12orf65
ATXN7
DLX5
PPFIA2
NUP205
ZNF77
TAGLN2
NNAT
BLCAP
SNAPC1
VSIG8
DDR2
SCGB1A1
CREB5
FH
PIGM
DENND1B
COPB2
SNCG
MMRN2
SUCLG1
MREG
UPF2
SMYD1
MAP1LC3C
KCND2
FAM135B
PSMD1
NOMO3
NOMO1
TCF4
SOCS6
ITGA4
CACNA2D1
GPR34
RPL21
FAM104A
C17orf80
ADK
AP3M1
HOXA3
SLC7A2
FAM151A
EHBP1
FAM240C
CYRIB
TMOD1
MAGEB10
IQCA1
TLE3
GTF2A1
FAM83B
SHMT2
SLC10A4
NDUFA4L2
CDK17
AQP4
FNDC7
KLHL38
SLC25A30
RAMP1
TIAF1
SOHLH2
PI4KB
MAP2
RBBP5
SCARB2
FAM47E
MAF
STRN
TPM1
GGT1
LRRC75B
TNFSF13B
ZRANB2
MGARP
LIMS1
STK36
RNF25
BCAR3
SH3BP4
TRIL
ABLIM1
BBS9
IFRD1
EPHA7
ANXA13
POLR2M
FGF1
DSC3
NAV2
LEO1
KYAT1
RIPOR2
PNO1
GPBAR1
HCRTR2
XRN2
KIAA0408
SH3BGRL2
SCRG1
FOXO1
ABCC3
SRPK2
FARSB
RPH3A
ENOX2
DNAH8
NT5E
SCN1A
RALYL
PPFIBP2
DCTN1
PRXL2A
HEATR5A
ARL6IP5
UBA3
SMAD1
CCDC68
OR8K3
BTN3A3
SLC35B1
TMEM205
RAB3D
CCDC159
TAB2
CNMD
GALNT15
DDIT4L
TTC8
FRG2C
SYNE3
CAPNS2
TYRO3
SOGA3
PM20D2
GDAP1
FABP2
CEP43
SCGN
OR2AE1
LIG3
MVB12A
BST2
GNA12
ANTXR2
MUC15
CNTNAP4
MORN3
NCDN
KIAA0319L
KIF26A
TTC12
CLIC4
LOC102724770
DGCR6
MAPK8IP1
PYROXD2
CSRP2
PCM1
ERI3
PPARG
SLC10A6
TVP23B
SHOC2
BBIP1
SRGAP2
FAM72A
RAPGEF4
MEGF6
ADRB2
PRL
SYNPO
TSACC
CCT3
SMAD2
LRRN3
ZFHX2
ERAP1
DACT1
MYF6
MYF5
TRPM3
CFAP20
NVL
ECT2L
FAM160A1
HOXC6
HOXC8
FAM72C
SRGAP2B
FAM72D
LRRC8B
SLAMF8
KCTD3
SACS
SUPV3L1
LIX1
MGP
FRZB
ZNF561
MSX2
FNIP2
RAI14
PRR16
NKX6-2
PSMD12
RIMBP2
SF3B3
COG4
CHRNA3
ARHGEF38
HTR3B
OR8J1
CCT2
PLAAT4
OR8K1
KNTC1
REXO1
DNAJB8
RPS6
FAM98A
ARID3B
EVA1A
RPL24
ST6GALNAC3
THEMIS
DCLK3
PGM5
NPY2R
DDX60
B3GAT2
LIG4
ABHD13
IGFBP4
OMP
FAM162B
METTL7A
CCDC200
SMLR1
ABR
MARCKS
TMC3
AOPEP
RGS18
KLK3
TSNAX
HOXB1
RWDD3
ADAM12
CCNE1
IL22
NFIB
ANAPC7
SLC22A8
GOLGA5
CDPF1
SEMA6D
ERICH2
TTI2
SLC39A14
UBTFL1
ANGPT1
LUM
ECE1
KLKB1
CYTIP
NCK2