ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX21236747 | IMR-32
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◣ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RWDD1
FAM187A
EFTUD2
CCDC103
HADHB
HADHA
NUP85
TAOK3
SUDS3
GOSR2
RABL2B
SLC35B1
PSMD12
ZNF335
MRPS7
MIF4GD
GGA3
NVL
RBBP5
RABL2A
CACTIN
NME6
PNO1
TSNAX
POLR3F
DZANK1
ZRANB2
REXO1
RPS12
MAPKAPK5
NNAT
BLCAP
PAK1IP1
C6orf52
VTI1B
PI4KB
TSN
HSPA9
POLR2E
GPX4
COX7A2L
C19orf48
VDAC2
USP29
NUP205
STAM
RABGGTB
NFKBIL1
DDX39B
ATP6V1G2
SART3
ISCU
PSMD1
RPS27A
CLHC1
DYNC1LI2
SEC61B
ALG2
EXOSC5
BCKDHA
DNAJB7
XPNPEP3
ST13
RPL21
FAM104A
C17orf80
FARSB
SELENOF
HS2ST1
TMED1
PSMG2
CEP76
LOC102724770
DGCR6
LYRM4
FARS2
USP1
HSPA1B
SUPV3L1
STAM2
DCTN1
OAZ3
MRPL9
SMC2
ZNF576
IRGQ
C6orf47
APOM
BAG6
UFM1
NDUFA4
DUX4
S1PR4
NCLN
ATP5MG
TBCK
AIMP1
PES1
RPS29
LRR1
UPF2
CAPRIN1
SUCLG1
COMMD1
CCT4
VARS1
RPS23
ATP6AP1L
ANAPC7
GOLGA5
RPL35A
IQCG
LMLN
TTC8
PCBP1
MRPS5
PROSER1
NHLRC3
SRD5A1
ETAA1
PDAP1
BUD31
ADK
AP3M1
ICE1
IPO13
TMEM101
SKP1
SFI1
EIF4ENIF1
CDC73
DPH6
GORAB
STK36
RNF25
UNKL
C16orf91
RPN1
PIP4P1
OSGEP
APEX1
SF3B3
COG4
AQP6
PIN4
OR6B2
NDUFA10
ARHGAP11A-SCG5
ARHGAP11A
TM9SF1
IPO4
TSSK4
PAF1
MTRNR2L8
MLEC
RBKS
BABAM2
CD24
TAF9
RAD17
AK6
CCDC43
PTGES2
ACTR10
TRIM65
MRPL38
GTF3C4
DDX31
AXDND1
GADD45GIP1
RPS10-NUDT3
RPS10
NRP1
EIF4H
KAT7
DUSP12
NPTX1
PTPRO
CNPY2
PCGF1
LBX2
TLX2
BAHCC1
HSD17B1
COASY
SMLR1
MAMDC2
KIAA1549
ZNF585B
ZNF383
EML2
MYCN
EIF2S3
RPL7
RDH10
SRSF11
LRRC40
TRIM2
IGFBPL1
UBE2I
KLHDC8A
NPTN
PFKP
OPRM1
CXCR4
BICRA
KIF3B
ATP6V1G3
CRHR1
B9D1
MFAP4
MAPK7
VWA3B
ATP1A1
NFATC4
WRAP53
TP53
MRTO4
EMC1
DPYSL3
ALKBH5
RPS24
POLR3A
MAD2L1BP
GTPBP2
RSPH9
APBA1
SEC11C
C9orf92
MBOAT2
ADAMTS8
RHBDF2
NELFA
CCDC68
SPCS1
GLT8D1
SLC35A3
CDON
IER5
CS
PHB
UNCX
DPYSL5
LY75-CD302
LY75
PPP1R18
NRM
TSHZ3
TCHP
AFF3
MAP3K14
BDNF
ANO3
LRRC43
IL31
CRYBG3
RFX8
DDX1
ACOT11
PCNX1
ST6GALNAC2
PPP1R35
ZCWPW1
MEPCE
ST6GALNAC3
SYBU
SLC22A23
ABCA4
GMEB2
FAM162A
CCDC58
SECTM1
RP1L1
KCNN3
TM6SF2
NCS1
HSPE1-MOB4
HSPE1
HSPD1
TPCN1
LAYN
XXYLT1
QPRT
INKA2
KIAA0319
ZBTB18
CHD8
CCDC59
PLEKHA6
SNRPD2
QPCTL
NRXN1
SAMD10
PRPF6
LIMA1
TSPAN11
PDHX
APIP
MTRNR2L1
GGA1
TIAM2
TAS2R40
TOB1
SPZ1
TBX2
CYTH3
PKN2
EGFLAM
DLC1
CRABP2
KREMEN1
ARSG
BCAT2
FRMD6
GPR88
LEMD2
PRRT2
MAZ
PAGR1
MVP
GTF3A
FBF1
PACS2
BRF1
TIMM10
SMTNL1
NKX6-2
XRCC5
VSTM2A
IFI35
RPL27
RBM25
TBC1D24
TOMM20
TEDC2
NTN3
MYLIP
TXNDC11
RUNDC3A
DHX8
KRTAP3-2
KRTAP3-3
KRT40
STAT3
ANK3
CD9
HNRNPA2B1
CBX3
PHOX2B
CHGA
TMC8
TMC6
CSRNP3
SMAD5
WDR7
JDP2
AKNAD1
DVL3
CDH2
KCNS2
SSH1
SUN1
NES
MYOG
IL6ST
UNC5A
TCAF2
PRPF3
DR1
CD74
PLEKHA5
CAPRIN2
GK2
MED10
B3GNT3
FRG2C
GBA
TMEM91
B9D2
CBFA2T2
SLC17A6
MYL4
TNFAIP2
CD180
AKT1
IGDCC4
SERTAD3
SNX1
CIAO2A
LOC283710
KRT84
XKR7
RBP1
H3Y2
OCA2
NOCT
CNBD2
FAM222B
CACNA1G
TRAF7
RAB26
MTHFD2L
METTL16
CHN2
CPVL
GCHFR
RMDN3
KTI12
NBEA
MAB21L1
GRAMD1B
SMYD3
IZUMO1R
MMD
COL23A1
GAMT
CIPC
PRSS55
BMERB1
TSHR
TMEM244
METTL24
NFE2L1
COPZ2
PELI2
CDK18
MAN2C1
PCGF3
MRPL27
EME1
RABGAP1L
FXYD6-FXYD2
FXYD6
EAPP
RASD2
DACT1
RALYL
F7
GRK5
SLC47A1
MEMO1
RNASEK
ALOX12
PLSCR5
MTRNR2L2
MSH3
DHFR
NAV1
H3Y1
CHRNA3
SEC22B
LGSN
RUNX1T1
AIG1
PSMD6
SSTR2
TRDMT1
TLX3
HMCN2
TBPL1
ANKLE2
GHRL
MEGF6
DBNDD1
KCNV2
PXYLP1
ZNF521
SYNPO
DCT
ARHGAP19
EYS
GDAP1
RGS3
DCUN1D4
SLC16A10
BAIAP2
FGD4
UFSP2
C4orf47
ANKFN1
MBD6
DDIT3
SLC6A2
GPRIN3
CD79A
ARHGEF1
KLF7
PRADC1
CCT7
CILP
VMP1
PTRH2
CHST8
CCDC33
GRIP1
RIMS3
RPS7
OMD
CA11
CKAP4
ARRDC4
TMEM167B
CERKL
CCDC167
SH2B1
CDK15
SATB1
TIMP2
RCOR1
BRD4
OR6N1
OR6K6
MFSD6
UQCRC2
WFIKKN2
RFX2
CMTR1
SLC26A1
IDUA
TRAP1
HPCA
HEPACAM2
FNDC5
VPS50
LZTS1
FAM43A
TMEM63B
MRPL14
GFRA2
H4C15
H4C14
H3C15
H3C14
HUS1
DENND4B
TRIOBP
SLC39A1
CRTC2
HAND1
NEDD4L
SLC29A4
PAXBP1
FRMPD1
CCDC200
TLE4
BAZ2A
ATP5F1B
SIRT4
VIP
SPHK2
RAB27B
RPL18
FAM83E
ACVR1C
SCHIP1
SF3B2
GAL3ST3
RFTN1
ZNF629
EBF3
DNAJC15
FBXO7
EGR1
PROKR1
CDO1
SYTL3
DYNLT1
SLAIN1
HTR1F
MGP
STK32B
IFI16
TLN1
CREB3
PYDC5
PTPN13
ACVR1
SEPTIN9
ARID5A
C3orf85
DOCK10
TNFRSF19
HCFC2
GLT8D2
TUBB
MDC1
UBAP2
PAN2
IL23A
MUC3A
ID2
TCF4
CDH7
WDR74
STX5
KCNK2
FRG2
RPP38
CERK
SYCP3
PRPSAP1
HDGF
MRPL24
TRIM67
NAV2
MLF2
TCP1
MRPL18
CLTC
PLEKHG7
TMEM107
KIF18B
PARP16
MAD2L2
DRAXIN
RAD23A
CALR
FARSA
ADCYAP1
MAPK13
MED13
BCAR3
TBC1D16
CCDC40
SMIM28
DGKB
PCBD2
SULF2
LYSMD2
MRPL58
ZNF503
NEUROG2
ZGPAT
ARFRP1
PPP1R1B
PDE6B
RARB
NEUROG3
HES1
HOXA3
ZNF608
ARF1
ICMT
HES3
HOXA4
PDE12
WNT1
HOXA1
ID1
DUSP29
SOAT2
IGFBP6
CDX2
SP2
MBTPS1
SKIL
DHRS3
RARA
ARID3B
GLRA1
LARP7
SPATC1L
CYP26A1
VEZT
FGD6
SNAPC1
FZD8
ARHGAP10
NFE2
NR2F1
PLAGL1
PMAIP1
G6PC2
IER3
FLOT1
HOXA2
PALM2AKAP2
H2BU1
H2AW
DUSP6
NDUFS7
NEUROD1
ZSWIM1
SPATA25
NEURL2
ZNF775
MUC20
ZP4
SERINC5
KCNN4
NEUROG1
ATOH1
RAB11FIP1
KAT6B
IGFBP2
DPP9
TBL2
CTSA
ERCC1
ZFHX4
BNIP3
GPR108
TPM1
BHLHE40
TLE3
LEFTY2
BBS9
TRIP10
LBX1
CDH18
FOXP1
ERRFI1
DDAH1
VSIR
HOXB1
TTI2
LIN28A
ST18
HOXA5
TBX3
ARHGDIA
PHC2
TLE2
INSM1
ASB2
ETS1
ZNF746
P4HB
NBEAL2
CCDC12
CDCA7L
TEPSIN
NDUFAF8
FAM222A
TAF12
LPIN1
DNM2
DAPL1
ARHGAP24
ARID3C
FGF19
TPRA1
PAH
MCM2
CITED2
SP1
SLC39A7
RXRB
HSD17B8
HOXB3
NHS
S100A10
URM1
FBXO31
NPAS4
DLL4
RHBDD3
EWSR1
ADNP2
NCOA7
HOXC4
MINDY2
HPD
SP5
PRUNE2
MAP1LC3B
PPP6R3
FILIP1L
ANKRD28
DCTN3
H2BC17
H2AC17
COL11A2
TMEM70
ELOC
CCN1
PDE4D
EXOC2
FRA10AC1
PDHB
CALCOCO1
RPL22
RNF207
RAB5B
PMEL
CDK2
FXYD2
HPCAL1
E4F1
SMAD3
CNTN1
KIF21B
CCNDBP1
ZFHX3
ANK2
MRPL34
DDA1
ABHD8
PKDCC
NFIA
CLGN
STX18
ARHGEF28
HOXC6
FABP7
KDM6B
CAMTA1
FRYL
TLE1
STAP2
ITGB6
ID3
KANSL3
FER1L5
OTUD7B
TMEM120B
TMEM242
DLX4
PPFIBP2
DONSON
DOLPP1
GPC6
KDM2B
ASB6
PDZRN3
PGK1
ABLIM3
ATF6
CERCAM
MAB21L2
FOXP2
POR
POP5
RBPJ
CADM3
MSX1
EXOSC4
SH3BP2
JUP
MFSD10
UPF3A
PRRX1
SMPDL3A
ARHGAP22
MRPL20
PPCDC
RARG
PC
NINJ2
RHBDD1
BCL3
KATNB1
PANK2
PTK2B
SQSTM1
KCNAB2
SHC1
TRIB1
CCDC174
RING1
MYLK4
MEIS2
ABHD2
CCNL2
ABCC10
IRF2BP2
SREBF1
MBNL3
ADAP1
ZNF687
SMARCD2
BMF
RFX1
CLCN3
MTMR4
LFNG
TMEM9
SMG6
KAZALD1
GATA4
MALRD1
DACT2
GPCPD1
NBPF1
ZFP36
PLEKHG2
CNOT2
CBX5
MIDEAS
MRPL3
USP17L21
USP17L20
USP17L12
TRIM46
KRTCAP2
SLX1B
SLX1A
BOLA2B
BOLA2
NRL
ZNF367
PCGF2
RNF34
TOP2A
PRKAG2
CALM2
RASSF5
SLC2A9
SPG7
PSPN
ALKBH7
SOCS3
NOL4L
EIF1B
HSPA1L
HSPA1A
HEXIM2
INHBE
GLI1
ANKHD1-EIF4EBP3
ANKHD1
MRPS31
FURIN
NUBP1
THOP1
SGTA
SACM1L
DLG2
ANGPTL4
USP17L22
RHOQ
ATP6V1E2
PCNA
ITGAV
RPL34
ECEL1
STAT1
CRYAA2
CRYAA
NFKBIA
NOTCH2
RPLP1
ASXL3
ARHGAP30
IQSEC3
POLDIP3
NR2F6
RNF103-CHMP3
RMND5A
HNMT
DNAH1
DCAF11
ZFAND2A
PDE4DIP
TRIM26
SSBP4
ZNF740
CSAD
PRDM10
NAV3
CDS2
ARRDC2
ASCL1
OSBP
NLK
GRIK2
ATP1B1
GPR20
SHF
EIF2AK3
SKI
ZNF77
IL17RD
STIP1
CSF3R
HMGCS1
SOD2
AHDC1
SERPINE1
LRATD2
STARD13
CLDN11
ART1
DSCAML1
TCP10L
TRIM7
SLC25A25
SEPTIN4
ZC3H3
RAB37
ECE1
MDM2
GADD45G
SLC45A4
RAB11B
CAPG
ME3
KNL1
BRMS1
RBBP7