ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039040 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◣ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
ZNF335
PSMD1
POLR3F
DZANK1
IPO13
DYNC1LI2
CACTIN
FAM187A
EFTUD2
CCDC103
NME6
NUP205
MAPKAPK5
NEUROG3
PSMG2
CEP76
TAOK3
SUDS3
RPL21
NUP85
MRPS7
MIF4GD
GGA3
VDAC2
NVL
HSPA9
DCTN1
RWDD1
VTI1B
GOSR2
TBCK
AIMP1
TSNAX
DPH6
STAM2
SKP1
HADHB
HADHA
STAM
RBKS
BABAM2
POLR2E
GPX4
ATP5MG
C19orf48
SEC61B
ALG2
PAK1IP1
C6orf52
SMC2
EXOSC5
BCKDHA
SRD5A1
ZNF576
IRGQ
ACTR10
MRPS5
DUX4
S1PR4
NCLN
TMED1
SLC35B1
COX7A2L
TTC8
TSN
PI4KB
NEUROG1
PNO1
FARSB
PDAP1
BUD31
LYRM4
FARS2
GOLGA5
PDE6B
ADK
AP3M1
PES1
NNAT
BLCAP
SUPV3L1
VARS1
FAM104A
C17orf80
REXO1
RPL35A
IQCG
LMLN
RPS23
ATP6AP1L
SFI1
EIF4ENIF1
ZNF503
CAPRIN1
UPF2
COMMD1
CCT4
ZRANB2
TM9SF1
IPO4
TSSK4
SELENOF
HS2ST1
RBBP5
CDX2
SART3
ISCU
NDUFA4
USP1
NEUROD1
HSPA1B
ANAPC7
DUSP29
PSMD12
IL23R
ICE1
CDCA7L
UFM1
FRG2C
PCBP1
TMEM70
ELOC
C6orf47
APOM
BAG6
PROSER1
NHLRC3
PIP4P1
OSGEP
APEX1
DLL4
ZNF652
PAF1
MYRIP
SF3B3
COG4
ATOH1
DLX4
RABGGTB
ECEL1
DNAJB7
XPNPEP3
ST13
ST18
INSM1
PTGES2
CABIN1
RPS12
PIN4
VEZT
FGD6
ZGPAT
ARFRP1
RPS29
LRR1
FRG2
OR6B2
NDUFA10
RPS27A
CLHC1
PALM2AKAP2
EIF2S3
RBPJ
NFKBIL1
DDX39B
ATP6V1G2
STIL
HES1
GALNT10
BNIP3
POP5
LOC102724770
DGCR6
GADD45GIP1
RBL2
RPL7
RDH10
MBD2
TAF9
RAD17
AK6
DENND1A
GORAB
DNAJB8
PCBD2
LPIN1
GPR108
TRIP10
DTNB
ID3
ZNF746
H2BU1
H2AW
MRS2
RAB11B
WDR6
ANKLE2
NEUROG2
SHB
MBTPS1
GADD45G
MRTO4
EMC1
ANKRD1
ACOT2
PAH
ASCL1
PDE12
SEC11C
UNCX
STK36
RNF25
PRUNE2
DAPL1
FGFRL1
ZNF664-RFLNA
ZNF664
CCDC92
CCNDBP1
PDHX
APIP
FZD8
GBX1
LEFTY2
PMAIP1
HESX1
MAGEA11
MSX2
CCDC33
TLE2
SKIL
RYBP
NFE2
EHF
AXDND1
CNTLN
GTF3C4
DDX31
ARHGAP11A-SCG5
ARHGAP11A
NKIRAS1
NR1D2
KHDRBS1
APLN
SLC25A6
ZNF704
LARP7
ALKBH5
TPRA1
MCM2
ZNF585B
ZNF383
SUCLG1
KCNN4
PLA1A
MBNL2
MSX1
FRAT2
RPN1
FOXC1
NXPH4
SPIN1
OPA3
DUSP6
ZNF649
SCIMP
ARHGEF38
MUC20
MAL
TIGD1
EIF4E2
PAX8
CDC73
MAST2
ID2
ACOT1
CDH18
GABRB2
TLE3
RARA
LIG3
PHACTR2
SYT12
TVP23C
UBE2I
FAM151B
SPCS1
GLT8D1
CNTN4
ZNF608
LYPD6B
OAZ3
MRPL9
TRPM3
UPF3A
DOT1L
AP3D1
CECR2
CCDC200
SRSF11
LRRC40
GSR
MEOX1
CCDC102A
S100A10
LIN28A
CNPY2
TMEM242
RAN
RTL10
GNB1L
FOXP1
METTL24
SKOR1
LMO4
FTL
BAX
BFSP1
GC
CERKL
TPM1
MELTF
HOXB9
KDM6B
RARB
LHX2
RIMS1
NKX2-6
ASB6
NEFH
MIER1
DNAI4
ATG10
RUNX1T1
BCAT2
RAD54L2
RSPO4
RBBP7
SYTL1
OTX1
KCNK2
TCP10L
METRN
ANTKMT
TMPRSS7
CDX1
B3GNT4
USP17L21
USP17L20
USP17L12
USP17L22
USP17L11
USP17L19
KRTAP2-3
KRTAP2-2
KRTAP2-1
KRTAP1-1
AP1B1
CALM2
TMEM275
DMBX1
PRSS22
PDHB
PRSS47
NTNG2
GSX1
CYP26A1
CBX4
TULP1
TBC1D8
SLC39A7
RXRB
HSD17B8
COL11A2
SYNJ2
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TMPPE
GLB1
MINK1
DUSP4
TAP1
PSMB9
SLC22A24
GATA4
LCOR
INKA2
PKDCC
MKRN2OS
MKRN2
KAT6B
RPS10-NUDT3
RPS10
KCNIP4
NKX2-3
UBXN11
CD52
VIP
KIF21B
HOXB1
BUB1B
AZIN1
BRWD3
MTCH2
CA5A
BANP
FAM118A
ADM
APBB1IP
CLEC10A
ZNF850
PHLDB2
USP17L18
USP17L17
C15orf61
SHROOM1
SOWAHA
FBXO32
DUSP14
CCDC174
NAGLU
SLIT1
C5orf63
DDX3X
WNT1
KRT18
TNFRSF19
ELF3
OTP
PCLO
MNT
PPL
SDK1
HOXA3
HOXA2
ST6GALNAC3
COCH
KAZALD1
CCND3
ACKR3
ZNF444
FRMD7
SERTAD2
LPCAT3
SDF4
B3GALT6
C1QTNF12
BCOR
SMARCA4
TRIM65
MRPL38
KMT5A
BICRA
RPL22
RNF207
GTF3A
SNX1
CIAO2A
EFEMP1
CHN2
CPVL
CADM3
STRADA
FOXP2
SEC22B
GRHL2
KLF17
SNRPA
C19orf54
SNAPC1
LYPD1
EIF4H
MLH1
EPM2AIP1
NRDE2
IRX4
OTUD7B
RPGRIP1
CDC42EP1
LGALS2
UNKL
C16orf91
RAB17
SOAT2
IGFBP6
SLC4A8
GALNT6
RBM26
LEKR1
HNRNPD
KRTAP10-12
ZFP37
TSPEAR
MEF2B
ZNF891
ZNF10
SEPTIN2
HDLBP
TCF7
SMAGP
MTRNR2L1
TEAD3
UROD
HECTD3
TRIM46
KRTCAP2
REC8
SCAMP4
ADAT3
PNPLA1
NCOA2
ZMIZ2
KMT5C
SMAD7
H3-3A
SSPN
PCDH8
RNF32
TMEM88B
CNR1
MYSM1
ANKRD65
PLEKHA6
CLDN9
SLC30A4
CLDN6
TCHP
CPB1
KCNJ4
CLDN15
FIS1
TACC1
VENTX
UTF1
CNPY3
JAKMIP1
PTCRA
WNT3
SYBU
ZSWIM1
SPATA25
NEURL2
CTSA
COL23A1
ZNF395
ATP6V0A4
SYTL3
DYNLT1
MACROH2A1
FEZF2
ZNF436
TIPIN
AQP7
JAK1
HOOK2
NR2C1
TTC13
MACF1
TAS2R9
TAS2R8
TAS2R7
PTPRF
RPS24
POLR3A
USP17L13
USP17L10
UBXN7
SMIM35
ZNF397
USP17L15
TMPRSS4
HOXA1
JUP
METTL11B
PCTP
BRWD1
SEMA6D
CEMP1
PDPK1
FAM53B
PCDHAC1
CD24
USP44
PTCH1
AGO1
GATA3
SYNE2
ABAT
RHOBTB2
STX18
PPCDC
AHSP
SUSD3
KCNB1
MARVELD3
KMT2A
NRG1
SH2B1
EOMES
CDS1
PPP1R1B
IL12RB2
NEUROD2
PEX14
DFFA
CFC1
KRTAP12-1
CYBRD1
CA12
ARF1
PLAGL1
SERPINF1
PPP1R35
MECOM
ZBTB40
ZCWPW1
MEPCE
IL17RD
ATG9B
ABCB8
RUSC2
CAV3
ESRRG
STON1-GTF2A1L
CLEC4G
COX5A
SNCG
MMRN2
BEND4
RPEL1
OR51T1
PHB2
FBXL4
TMEM167B
SERTAD3
MAPK12
MAPRE1
SOD2
ACAT2
CERS2
ANXA9
GYG2
URM1
TMEM259
CNN2
AEN
KCNN2
LIPC
EVC
EVC2
SH3YL1
ACP1
PIK3R3
KCNS3
TSPAN1
P3R3URF-PIK3R3
P3R3URF
AKAP10
HINT1
MDM2
NELFA
PRELID3B
BAMBI
GJA10
FOXA2
ADAM17
PLXNB1
NFATC1
RPLP1
AFG1L
ERI1
UFSP2
C4orf47
ERRFI1
TARBP2
MAP3K12
NPFF
PRKD1
RBBP8NL
ACYP1
ZC2HC1C
SMIM22
ROGDI
YTHDF2
ZBTB25
ZBTB1
CDC42EP3
PKIB
NANP
LIPK
PRDM10
TNRC18
ZSWIM4
TRAP1
ZNF248
ERFL
YOD1
PFKFB2
ZNF90
SLC2A9
RPIA
CS
CNOT2
KDM3A
IGF2BP3
LIX1
DNAJB5
CTF1
BCL7C
CENPBD1
PFN2
BTBD3
MRPL34
DDA1
ABHD8
GPC6
MAP2K3
KDM7A
CPLX2
CRYBG1
SLC40A1
LGALS4
METTL27
IKZF2
CLGN
CATSPERG
NFIC
CDC42SE2
SLC39A10
ZSCAN30
GBX2
KDM4C
BBS9
MINDY2
KCNQ4
TMEM54
ANKRD63
PLA2G4D
ING1
CARS2
KAT6A
SS18L1
PSMA7
EBLN1
SGK1
RBMS3
PIGU
LGR6
BOC
PTPRG
PDZRN3
CLK1
CTSZ
FAM162A
CCDC58
FRMD4A
RIC3
NTAN1
RPS3A
PXYLP1
TNS3
CPLX1
ZDHHC17
WDR91
DHRS3
CCDC59
GATD3B
GATD3A
FAM110A
UBL3
DONSON
ETFDH
C4orf46
PDE4D
HES7
ALOXE3
CTBP2
PLAAT4
ACTB
ACTR6
C11orf96
TMEM211
FBN2
INHBE
GLI1
NRG2
FKBP1A
CXXC4
ZNF341
MDK
ICMT
HES3
ORMDL3
GSDMB
EIF5
RGPD8
RGPD5
PEX2
VIPR2
TEX12
BCO2
KLHL4
RAPH1
ZNF485
RIT2
SBNO2
HCAR3
HCAR2
ABLIM3
ABCC6
NOMO3
NOMO2
SNX3
HSPA4L
ZBTB17
NOL4
ZNF827
BMPR1B
SRSF10
TRIM56
ZBTB20
HIC2
SIGIRR
STAT1
EPS8
ZADH2
TSHZ1
WDR7
LAD1
PPP1R13B
RPS8
CMTR1
SYDE2
INHBB
NAA40
TRIP12
FBXO36
SLC11A2
ZFAND6
RILPL1
TBX19
CLCN3
NEK1
NPNT
TTC21B
IGFBP2
RHOBTB1
PDE4C
MTRNR2L2
MSH3
DHFR
HOXA4
ID1
SP2
MTRNR2L8
GLRA1
SPATC1L
ARID3B
EAPP
ARHGAP10
NR2F1
G6PC2
IER3
FLOT1
NDUFS7
ZNF775
ZP4
SERINC5
TMEM107
RAB11FIP1
CBFA2T2
DPP9
LZTS1
TBL2
ERCC1
ZFHX4
BHLHE40
LBX1
DDAH1
VSIR
TLE4
TTI2
HOXA5
TBX3
ARHGDIA
PHC2
ASB2
WDR74
STX5
ETS1
P4HB
NBEAL2
CCDC12
TEPSIN
NDUFAF8
FAM222A
DNM2
ARHGAP24
ARID3C
TAF12
FGF19
CITED2
SP1
HOXB3
NHS
FBXO31
NPAS4
RHBDD3
EWSR1
ADNP2
NCOA7
HOXC4
HPD
SP5
PHOX2B
MAP1LC3B
PPP6R3
FILIP1L
ANKRD28
DCTN3
H2BC17
H2AC17
CCN1
EXOC2
TBX2
CALCOCO1
RAB5B
PMEL
CDK2
FXYD2
HPCAL1
E4F1
SMAD3
MAMDC2
CNTN1
ZFHX3
ANK2
NFIA
ARHGEF28
FRA10AC1
HOXC6
FABP7
CAMTA1
FRYL
TLE1
STAP2
ITGB6
KANSL3
FER1L5
CRABP2
TMEM120B
PCGF1
PPFIBP2
DOLPP1
AQP6
KDM2B
PGK1
BAZ2A
SYNPO
ATF6
CERCAM
MAB21L2
POR
HUS1
EXOSC4
SH3BP2
MFSD10
PRRX1
SMPDL3A
ARHGAP22
SEPTIN9
MRPL20
RARG
PC
NINJ2
RHBDD1
BCL3
KATNB1
XKR7
PTK2B
SQSTM1
LBX2
KCNAB2
ARRDC4
SHC1
TRIB1
RING1
MYLK4
MEIS2
CCNL2
ARSG
ABCC10